Phosphorus in PDB 1al7: Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors

Enzymatic activity of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors

All present enzymatic activity of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors:
1.1.3.15;

Protein crystallography data

The structure of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors, PDB code: 1al7 was solved by K.Stenberg, Y.Lindqvist, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.60
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 148.100, 148.100, 136.500, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 24.2

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors (pdb code 1al7). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total only one binding site of Phosphorus was determined in the Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors, PDB code: 1al7:

Phosphorus binding site 1 out of 1 in 1al7

Go back to Phosphorus Binding Sites List in 1al7
Phosphorus binding site 1 out of 1 in the Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P360

b:16.0
occ:1.00
P A:FMN360 0.0 16.0 1.0
O3P A:FMN360 1.4 16.1 1.0
O2P A:FMN360 1.5 11.1 1.0
O1P A:FMN360 1.5 13.4 1.0
O5' A:FMN360 1.6 5.1 1.0
C5' A:FMN360 2.7 11.6 1.0
O4' A:FMN360 3.5 2.0 1.0
C4' A:FMN360 3.5 12.0 1.0
NH2 A:ARG289 3.5 11.6 1.0
O A:HOH363 3.6 2.0 1.0
NH1 A:ARG289 3.6 7.1 1.0
NH1 A:ARG309 3.8 6.0 1.0
N A:GLY308 3.8 5.8 1.0
CA A:GLY286 3.9 4.1 1.0
N A:ARG309 4.0 2.1 1.0
O A:HOH398 4.0 18.3 1.0
N A:GLY287 4.0 4.5 1.0
CZ A:ARG289 4.0 12.7 1.0
CA A:GLY308 4.1 3.7 1.0
N A:GLY286 4.2 2.5 1.0
C A:GLY286 4.5 4.9 1.0
CG A:ARG309 4.5 7.0 1.0
C A:GLY308 4.6 2.0 1.0
CB A:ARG309 4.7 4.5 1.0
CD A:PRO310 4.8 5.6 1.0
CA A:GLY255 4.8 2.0 1.0
C A:ILE307 4.9 11.3 1.0
CZ A:ARG309 5.0 2.2 1.0
CA A:ARG309 5.0 3.0 1.0

Reference:

K.Stenberg, Y.Lindqvist. Three-Dimensional Structures of Glycolate Oxidase with Bound Active-Site Inhibitors. Protein Sci. V. 6 1009 1997.
ISSN: ISSN 0961-8368
PubMed: 9144771
Page generated: Fri Sep 25 13:15:16 2020

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