Phosphorus in PDB 1al7: Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors

Enzymatic activity of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors

All present enzymatic activity of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors:
1.1.3.15;

Protein crystallography data

The structure of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors, PDB code: 1al7 was solved by K.Stenberg, Y.Lindqvist, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.60
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 148.100, 148.100, 136.500, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 24.2

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors (pdb code 1al7). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total only one binding site of Phosphorus was determined in the Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors, PDB code: 1al7:

Phosphorus binding site 1 out of 1 in 1al7

Go back to Phosphorus Binding Sites List in 1al7
Phosphorus binding site 1 out of 1 in the Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of Three-Dimensional Structures of Glycolate Oxidase with Bound Active- Site Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P360

b:16.0
occ:1.00
P A:FMN360 0.0 16.0 1.0
O3P A:FMN360 1.4 16.1 1.0
O2P A:FMN360 1.5 11.1 1.0
O1P A:FMN360 1.5 13.4 1.0
O5' A:FMN360 1.6 5.1 1.0
C5' A:FMN360 2.7 11.6 1.0
O4' A:FMN360 3.5 2.0 1.0
C4' A:FMN360 3.5 12.0 1.0
NH2 A:ARG289 3.5 11.6 1.0
O A:HOH363 3.6 2.0 1.0
NH1 A:ARG289 3.6 7.1 1.0
NH1 A:ARG309 3.8 6.0 1.0
N A:GLY308 3.8 5.8 1.0
CA A:GLY286 3.9 4.1 1.0
N A:ARG309 4.0 2.1 1.0
O A:HOH398 4.0 18.3 1.0
N A:GLY287 4.0 4.5 1.0
CZ A:ARG289 4.0 12.7 1.0
CA A:GLY308 4.1 3.7 1.0
N A:GLY286 4.2 2.5 1.0
C A:GLY286 4.5 4.9 1.0
CG A:ARG309 4.5 7.0 1.0
C A:GLY308 4.6 2.0 1.0
CB A:ARG309 4.7 4.5 1.0
CD A:PRO310 4.8 5.6 1.0
CA A:GLY255 4.8 2.0 1.0
C A:ILE307 4.9 11.3 1.0
CZ A:ARG309 5.0 2.2 1.0
CA A:ARG309 5.0 3.0 1.0

Reference:

K.Stenberg, Y.Lindqvist. Three-Dimensional Structures of Glycolate Oxidase with Bound Active-Site Inhibitors. Protein Sci. V. 6 1009 1997.
ISSN: ISSN 0961-8368
PubMed: 9144771
Page generated: Fri Sep 25 13:15:16 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy