Phosphorus in PDB 1akv: D95A Semiquinone Flavodoxin Mutant From D. Vulgaris

Protein crystallography data

The structure of D95A Semiquinone Flavodoxin Mutant From D. Vulgaris, PDB code: 1akv was solved by A.Mccarthy, M.Walsh, T.Higgins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.00
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 52.610, 52.610, 138.340, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 25

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the D95A Semiquinone Flavodoxin Mutant From D. Vulgaris (pdb code 1akv). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total only one binding site of Phosphorus was determined in the D95A Semiquinone Flavodoxin Mutant From D. Vulgaris, PDB code: 1akv:

Phosphorus binding site 1 out of 1 in 1akv

Go back to Phosphorus Binding Sites List in 1akv
Phosphorus binding site 1 out of 1 in the D95A Semiquinone Flavodoxin Mutant From D. Vulgaris


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of D95A Semiquinone Flavodoxin Mutant From D. Vulgaris within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P152

b:6.0
occ:1.00
P A:FMN152 0.0 6.0 1.0
O5' A:FMN152 1.6 8.4 1.0
O3P A:FMN152 1.6 8.8 1.0
O1P A:FMN152 1.7 11.4 1.0
O2P A:FMN152 1.7 10.5 1.0
C5' A:FMN152 2.7 10.1 1.0
OG A:SER58 3.4 8.8 1.0
CB A:SER58 3.4 5.4 1.0
OG A:SER10 3.6 6.7 1.0
N A:THR11 3.6 9.4 1.0
N A:THR12 3.7 11.7 1.0
N A:ASN14 3.8 7.8 1.0
C4' A:FMN152 3.9 7.9 1.0
OG1 A:THR12 3.9 16.3 1.0
OG1 A:THR15 3.9 10.6 1.0
CB A:ASN14 4.0 1.7 1.0
N A:THR15 4.0 9.6 1.0
CA A:SER10 4.1 7.3 1.0
N A:GLY13 4.2 12.6 1.0
O4' A:FMN152 4.3 9.9 1.0
C A:SER10 4.4 9.4 1.0
CB A:SER10 4.4 5.2 1.0
CA A:ASN14 4.4 4.4 1.0
CA A:THR11 4.5 10.6 1.0
CA A:THR12 4.5 13.6 1.0
C A:THR11 4.5 8.0 1.0
CZ2 A:TRP60 4.6 7.6 1.0
CB A:THR15 4.6 6.5 1.0
C A:THR12 4.6 18.6 1.0
C A:ASN14 4.7 9.8 1.0
CB A:THR11 4.7 9.1 1.0
CB A:THR12 4.8 11.8 1.0
CG A:ASN14 4.8 7.7 1.0
CB A:CYS93 4.8 9.8 1.0
CA A:SER58 4.8 8.1 1.0
C A:GLY13 4.8 10.6 1.0
CA A:THR15 4.8 8.8 1.0
ND2 A:ASN14 4.9 8.0 1.0

Reference:

A.A.Mccarthy, M.A.Walsh, C.S.Verma, D.P.O'connell, M.Reinhold, G.N.Yalloway, D.D'arcy, T.M.Higgins, G.Voordouw, S.G.Mayhew. Crystallographic Investigation of the Role of Aspartate 95 in the Modulation of the Redox Potentials of Desulfovibrio Vulgaris Flavodoxin. Biochemistry V. 41 10950 2002.
ISSN: ISSN 0006-2960
PubMed: 12206666
DOI: 10.1021/BI020225H
Page generated: Fri Sep 25 13:06:30 2020

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