Phosphorus in PDB 1ahb: The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin

Enzymatic activity of The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin

All present enzymatic activity of The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin:
3.2.2.22;

Protein crystallography data

The structure of The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin, PDB code: 1ahb was solved by J.Ren, Y.Wang, Y.Dong, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.20
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 131.400, 131.400, 49.800, 90.00, 90.00, 120.00
R / Rfree (%) 17.5 / n/a

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin (pdb code 1ahb). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total only one binding site of Phosphorus was determined in the The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin, PDB code: 1ahb:

Phosphorus binding site 1 out of 1 in 1ahb

Go back to Phosphorus Binding Sites List in 1ahb
Phosphorus binding site 1 out of 1 in the The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P339

b:0.7
occ:1.00
P A:FMP339 0.0 0.7 1.0
O1P A:FMP339 1.5 0.6 1.0
O2P A:FMP339 1.5 0.9 1.0
O3P A:FMP339 1.5 0.9 1.0
O5' A:FMP339 1.6 99.9 1.0
C5' A:FMP339 2.7 70.3 1.0
O A:HOH340 3.1 28.8 1.0
O A:HOH341 3.9 37.3 1.0
C4' A:FMP339 3.9 50.9 1.0
C3' A:FMP339 4.3 43.4 1.0
O4' A:FMP339 4.3 32.7 1.0
O A:HOH343 4.9 26.5 1.0
C2' A:FMP339 5.0 37.8 1.0

Reference:

J.Ren, Y.Wang, Y.Dong, D.I.Stuart. The N-Glycosidase Mechanism of Ribosome-Inactivating Proteins Implied By Crystal Structures of Alpha-Momorcharin. Structure V. 2 7 1994.
ISSN: ISSN 0969-2126
PubMed: 8075985
DOI: 10.1016/S0969-2126(00)00004-6
Page generated: Fri Sep 25 12:56:09 2020

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