Phosphorus in PDB 1ag9: Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution.

Protein crystallography data

The structure of Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution., PDB code: 1ag9 was solved by D.M.Hoover, M.L.Ludwig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 126.400, 41.100, 68.150, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 25

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution. (pdb code 1ag9). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total 2 binding sites of Phosphorus where determined in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution., PDB code: 1ag9:
Jump to Phosphorus binding site number: 1; 2;

Phosphorus binding site 1 out of 2 in 1ag9

Go back to Phosphorus Binding Sites List in 1ag9
Phosphorus binding site 1 out of 2 in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution.


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P177

b:16.2
occ:1.00
P A:FMN177 0.0 16.2 1.0
O3P A:FMN177 1.4 14.4 1.0
O5' A:FMN177 1.5 14.8 1.0
O1P A:FMN177 1.5 17.5 1.0
O2P A:FMN177 1.5 16.9 1.0
C5' A:FMN177 2.5 13.2 1.0
OG A:SER10 3.6 18.3 1.0
N A:THR12 3.6 15.6 1.0
OG1 A:THR12 3.7 26.1 1.0
N A:ASP11 3.7 18.6 1.0
C4' A:FMN177 3.8 13.6 1.0
N A:ASN14 3.8 16.0 1.0
CB A:PRO55 3.9 11.0 1.0
CG A:PRO55 3.9 12.7 1.0
NE1 A:TRP57 3.9 16.6 1.0
CB A:ASN14 4.0 14.0 1.0
N A:THR15 4.0 14.8 1.0
OG1 A:THR15 4.0 11.2 1.0
CZ2 A:TRP57 4.1 20.7 1.0
N A:GLY13 4.1 17.4 1.0
O4' A:FMN177 4.2 13.6 1.0
CA A:ASN14 4.3 14.3 1.0
CA A:THR12 4.3 17.8 1.0
CE2 A:TRP57 4.4 19.1 1.0
CA A:SER10 4.4 17.1 1.0
C A:THR12 4.4 19.2 1.0
CB A:SER10 4.5 15.3 1.0
CA A:ASP11 4.5 19.4 1.0
C A:SER10 4.5 18.8 1.0
C A:ASP11 4.5 20.2 1.0
CB A:ASP11 4.6 21.0 1.0
CB A:THR12 4.6 19.7 1.0
C A:ASN14 4.7 13.3 1.0
C A:GLY13 4.7 16.7 1.0
CG A:ASN14 4.7 17.3 1.0
CB A:THR15 4.7 13.5 1.0
OD1 A:ASN14 4.7 19.1 1.0
CA A:GLY13 4.9 16.5 1.0
CA A:THR15 5.0 14.4 1.0

Phosphorus binding site 2 out of 2 in 1ag9

Go back to Phosphorus Binding Sites List in 1ag9
Phosphorus binding site 2 out of 2 in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution.


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 2 of Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:P177

b:15.2
occ:1.00
P B:FMN177 0.0 15.2 1.0
O3P B:FMN177 1.4 13.0 1.0
O1P B:FMN177 1.4 15.4 1.0
O2P B:FMN177 1.5 16.1 1.0
O5' B:FMN177 1.5 13.3 1.0
C5' B:FMN177 2.5 16.0 1.0
OG B:SER10 3.5 11.0 1.0
N B:THR12 3.7 14.3 1.0
OG1 B:THR12 3.7 19.1 1.0
N B:ASP11 3.7 12.8 1.0
N B:ASN14 3.8 16.5 1.0
C4' B:FMN177 3.8 17.0 1.0
CB B:PRO55 3.9 13.0 1.0
CG B:PRO55 3.9 13.0 1.0
N B:THR15 3.9 14.2 1.0
OG1 B:THR15 3.9 12.5 1.0
NE1 B:TRP57 4.0 15.4 1.0
CB B:ASN14 4.0 16.1 1.0
N B:GLY13 4.1 16.0 1.0
CZ2 B:TRP57 4.2 12.6 1.0
CA B:SER10 4.2 10.8 1.0
O4' B:FMN177 4.3 17.3 1.0
CA B:ASN14 4.3 16.2 1.0
CB B:SER10 4.3 10.4 1.0
CA B:THR12 4.4 15.8 1.0
C B:SER10 4.5 12.9 1.0
CE2 B:TRP57 4.5 12.8 1.0
C B:THR12 4.5 17.3 1.0
CB B:THR15 4.6 12.6 1.0
CA B:ASP11 4.6 13.3 1.0
CG B:ASN14 4.6 16.9 1.0
C B:ASN14 4.6 16.2 1.0
C B:ASP11 4.6 13.5 1.0
OD1 B:ASN14 4.7 17.1 1.0
CB B:THR12 4.7 16.6 1.0
C B:GLY13 4.7 14.8 1.0
CB B:ASP11 4.9 13.5 1.0
CA B:THR15 4.9 13.0 1.0
CA B:GLY13 4.9 15.4 1.0

Reference:

D.M.Hoover, M.L.Ludwig. A Flavodoxin That Is Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 A Resolution. Protein Sci. V. 6 2525 1997.
ISSN: ISSN 0961-8368
PubMed: 9416602
Page generated: Fri Sep 25 12:50:47 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy