Phosphorus in PDB 1ag9: Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution.

Protein crystallography data

The structure of Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution., PDB code: 1ag9 was solved by D.M.Hoover, M.L.Ludwig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 126.400, 41.100, 68.150, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 25

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution. (pdb code 1ag9). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total 2 binding sites of Phosphorus where determined in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution., PDB code: 1ag9:
Jump to Phosphorus binding site number: 1; 2;

Phosphorus binding site 1 out of 2 in 1ag9

Go back to Phosphorus Binding Sites List in 1ag9
Phosphorus binding site 1 out of 2 in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution.


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P177

b:16.2
occ:1.00
P A:FMN177 0.0 16.2 1.0
O3P A:FMN177 1.4 14.4 1.0
O5' A:FMN177 1.5 14.8 1.0
O1P A:FMN177 1.5 17.5 1.0
O2P A:FMN177 1.5 16.9 1.0
C5' A:FMN177 2.5 13.2 1.0
OG A:SER10 3.6 18.3 1.0
N A:THR12 3.6 15.6 1.0
OG1 A:THR12 3.7 26.1 1.0
N A:ASP11 3.7 18.6 1.0
C4' A:FMN177 3.8 13.6 1.0
N A:ASN14 3.8 16.0 1.0
CB A:PRO55 3.9 11.0 1.0
CG A:PRO55 3.9 12.7 1.0
NE1 A:TRP57 3.9 16.6 1.0
CB A:ASN14 4.0 14.0 1.0
N A:THR15 4.0 14.8 1.0
OG1 A:THR15 4.0 11.2 1.0
CZ2 A:TRP57 4.1 20.7 1.0
N A:GLY13 4.1 17.4 1.0
O4' A:FMN177 4.2 13.6 1.0
CA A:ASN14 4.3 14.3 1.0
CA A:THR12 4.3 17.8 1.0
CE2 A:TRP57 4.4 19.1 1.0
CA A:SER10 4.4 17.1 1.0
C A:THR12 4.4 19.2 1.0
CB A:SER10 4.5 15.3 1.0
CA A:ASP11 4.5 19.4 1.0
C A:SER10 4.5 18.8 1.0
C A:ASP11 4.5 20.2 1.0
CB A:ASP11 4.6 21.0 1.0
CB A:THR12 4.6 19.7 1.0
C A:ASN14 4.7 13.3 1.0
C A:GLY13 4.7 16.7 1.0
CG A:ASN14 4.7 17.3 1.0
CB A:THR15 4.7 13.5 1.0
OD1 A:ASN14 4.7 19.1 1.0
CA A:GLY13 4.9 16.5 1.0
CA A:THR15 5.0 14.4 1.0

Phosphorus binding site 2 out of 2 in 1ag9

Go back to Phosphorus Binding Sites List in 1ag9
Phosphorus binding site 2 out of 2 in the Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution.


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 2 of Flavodoxins That Are Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 Angstroms Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:P177

b:15.2
occ:1.00
P B:FMN177 0.0 15.2 1.0
O3P B:FMN177 1.4 13.0 1.0
O1P B:FMN177 1.4 15.4 1.0
O2P B:FMN177 1.5 16.1 1.0
O5' B:FMN177 1.5 13.3 1.0
C5' B:FMN177 2.5 16.0 1.0
OG B:SER10 3.5 11.0 1.0
N B:THR12 3.7 14.3 1.0
OG1 B:THR12 3.7 19.1 1.0
N B:ASP11 3.7 12.8 1.0
N B:ASN14 3.8 16.5 1.0
C4' B:FMN177 3.8 17.0 1.0
CB B:PRO55 3.9 13.0 1.0
CG B:PRO55 3.9 13.0 1.0
N B:THR15 3.9 14.2 1.0
OG1 B:THR15 3.9 12.5 1.0
NE1 B:TRP57 4.0 15.4 1.0
CB B:ASN14 4.0 16.1 1.0
N B:GLY13 4.1 16.0 1.0
CZ2 B:TRP57 4.2 12.6 1.0
CA B:SER10 4.2 10.8 1.0
O4' B:FMN177 4.3 17.3 1.0
CA B:ASN14 4.3 16.2 1.0
CB B:SER10 4.3 10.4 1.0
CA B:THR12 4.4 15.8 1.0
C B:SER10 4.5 12.9 1.0
CE2 B:TRP57 4.5 12.8 1.0
C B:THR12 4.5 17.3 1.0
CB B:THR15 4.6 12.6 1.0
CA B:ASP11 4.6 13.3 1.0
CG B:ASN14 4.6 16.9 1.0
C B:ASN14 4.6 16.2 1.0
C B:ASP11 4.6 13.5 1.0
OD1 B:ASN14 4.7 17.1 1.0
CB B:THR12 4.7 16.6 1.0
C B:GLY13 4.7 14.8 1.0
CB B:ASP11 4.9 13.5 1.0
CA B:THR15 4.9 13.0 1.0
CA B:GLY13 4.9 15.4 1.0

Reference:

D.M.Hoover, M.L.Ludwig. A Flavodoxin That Is Required For Enzyme Activation: the Structure of Oxidized Flavodoxin From Escherichia Coli at 1.8 A Resolution. Protein Sci. V. 6 2525 1997.
ISSN: ISSN 0961-8368
PubMed: 9416602
Page generated: Fri Sep 25 12:50:47 2020

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