Phosphorus in PDB 1aca: Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A
Phosphorus Binding Sites:
The binding sites of Phosphorus atom in the Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A
(pdb code 1aca). This binding sites where shown within
5.0 Angstroms radius around Phosphorus atom.
In total 3 binding sites of Phosphorus where determined in the
Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A, PDB code: 1aca:
Jump to Phosphorus binding site number:
1;
2;
3;
Phosphorus binding site 1 out
of 3 in 1aca
Go back to
Phosphorus Binding Sites List in 1aca
Phosphorus binding site 1 out
of 3 in the Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 1 of Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P87
b:1.3
occ:1.00
|
P3B
|
A:COA87
|
0.0
|
1.3
|
1.0
|
O7A
|
A:COA87
|
1.5
|
2.7
|
1.0
|
O8A
|
A:COA87
|
1.5
|
1.3
|
1.0
|
O9A
|
A:COA87
|
1.5
|
1.5
|
1.0
|
O3B
|
A:COA87
|
1.6
|
1.7
|
1.0
|
HZ2
|
A:LYS54
|
2.3
|
0.7
|
1.0
|
HH
|
A:TYR28
|
2.4
|
0.7
|
1.0
|
HO2A
|
A:COA87
|
2.5
|
1.0
|
1.0
|
C3B
|
A:COA87
|
2.7
|
1.8
|
1.0
|
HZ3
|
A:LYS54
|
2.8
|
1.9
|
1.0
|
HE1
|
A:TYR28
|
2.9
|
0.8
|
1.0
|
H3B
|
A:COA87
|
2.9
|
2.1
|
1.0
|
HZ2
|
A:LYS32
|
2.9
|
1.3
|
1.0
|
HG3
|
A:LYS54
|
3.1
|
1.3
|
1.0
|
NZ
|
A:LYS54
|
3.1
|
1.2
|
1.0
|
OH
|
A:TYR28
|
3.2
|
0.5
|
1.0
|
O2B
|
A:COA87
|
3.2
|
0.9
|
1.0
|
HZ1
|
A:LYS54
|
3.4
|
1.8
|
1.0
|
CE1
|
A:TYR28
|
3.4
|
0.5
|
1.0
|
HZ1
|
A:LYS32
|
3.4
|
0.4
|
1.0
|
HB2
|
A:LYS54
|
3.5
|
1.1
|
1.0
|
C2B
|
A:COA87
|
3.5
|
1.3
|
1.0
|
CZ
|
A:TYR28
|
3.6
|
0.5
|
1.0
|
NZ
|
A:LYS32
|
3.8
|
0.5
|
1.0
|
H4B
|
A:COA87
|
3.8
|
2.5
|
1.0
|
CG
|
A:LYS54
|
3.9
|
0.8
|
1.0
|
C4B
|
A:COA87
|
3.9
|
2.1
|
1.0
|
CB
|
A:LYS54
|
4.1
|
0.8
|
1.0
|
HB3
|
A:LYS54
|
4.1
|
1.0
|
1.0
|
HD2
|
A:LYS54
|
4.1
|
1.1
|
1.0
|
HZ3
|
A:LYS32
|
4.2
|
1.2
|
1.0
|
H2B
|
A:COA87
|
4.2
|
1.6
|
1.0
|
CE
|
A:LYS54
|
4.3
|
1.4
|
1.0
|
CD
|
A:LYS54
|
4.3
|
0.5
|
1.0
|
CD1
|
A:TYR28
|
4.5
|
0.5
|
1.0
|
O1A
|
A:COA87
|
4.5
|
5.1
|
1.0
|
C1B
|
A:COA87
|
4.6
|
0.9
|
1.0
|
H1B
|
A:COA87
|
4.6
|
0.7
|
1.0
|
CE2
|
A:TYR28
|
4.7
|
0.8
|
1.0
|
HG2
|
A:LYS54
|
4.7
|
0.8
|
1.0
|
O4B
|
A:COA87
|
4.8
|
1.5
|
1.0
|
HE3
|
A:LYS54
|
4.8
|
2.2
|
1.0
|
HD1
|
A:TYR28
|
4.8
|
0.8
|
1.0
|
HD3
|
A:LYS32
|
4.9
|
0.3
|
1.0
|
CE
|
A:LYS32
|
4.9
|
0.5
|
1.0
|
HE2
|
A:LYS32
|
4.9
|
0.8
|
1.0
|
|
Phosphorus binding site 2 out
of 3 in 1aca
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Phosphorus Binding Sites List in 1aca
Phosphorus binding site 2 out
of 3 in the Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 2 of Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P87
b:4.2
occ:1.00
|
P1A
|
A:COA87
|
0.0
|
4.2
|
1.0
|
O2A
|
A:COA87
|
1.5
|
3.6
|
1.0
|
O1A
|
A:COA87
|
1.5
|
5.1
|
1.0
|
O3A
|
A:COA87
|
1.5
|
5.4
|
1.0
|
O5B
|
A:COA87
|
1.6
|
2.9
|
1.0
|
C5B
|
A:COA87
|
2.6
|
2.8
|
1.0
|
P2A
|
A:COA87
|
2.6
|
5.3
|
1.0
|
H51A
|
A:COA87
|
2.7
|
3.6
|
1.0
|
H3B
|
A:COA87
|
2.8
|
2.1
|
1.0
|
H122
|
A:COA87
|
3.1
|
3.2
|
1.0
|
O6A
|
A:COA87
|
3.1
|
3.0
|
1.0
|
HZ1
|
A:LYS54
|
3.2
|
1.8
|
1.0
|
HE3
|
A:LYS50
|
3.2
|
1.4
|
1.0
|
O4A
|
A:COA87
|
3.2
|
6.3
|
1.0
|
H52A
|
A:COA87
|
3.3
|
2.7
|
1.0
|
H121
|
A:COA87
|
3.3
|
2.0
|
1.0
|
CCP
|
A:COA87
|
3.4
|
2.0
|
1.0
|
C3B
|
A:COA87
|
3.6
|
1.8
|
1.0
|
C4B
|
A:COA87
|
3.6
|
2.1
|
1.0
|
HE2
|
A:LYS50
|
3.7
|
1.1
|
1.0
|
H2B
|
A:COA87
|
3.7
|
1.6
|
1.0
|
O5A
|
A:COA87
|
3.8
|
6.9
|
1.0
|
CE
|
A:LYS50
|
3.9
|
0.6
|
1.0
|
NZ
|
A:LYS54
|
4.1
|
1.2
|
1.0
|
HE2
|
A:LYS54
|
4.1
|
2.1
|
1.0
|
HZ2
|
A:LYS54
|
4.2
|
0.7
|
1.0
|
C2B
|
A:COA87
|
4.2
|
1.3
|
1.0
|
HZ1
|
A:LYS50
|
4.3
|
2.1
|
1.0
|
H4B
|
A:COA87
|
4.4
|
2.5
|
1.0
|
H8A
|
A:COA87
|
4.5
|
1.5
|
1.0
|
HO1
|
A:COA87
|
4.5
|
0.6
|
1.0
|
O4B
|
A:COA87
|
4.6
|
1.5
|
1.0
|
NZ
|
A:LYS50
|
4.6
|
1.2
|
1.0
|
O8A
|
A:COA87
|
4.7
|
1.3
|
1.0
|
HZ2
|
A:LYS50
|
4.7
|
1.6
|
1.0
|
CE
|
A:LYS54
|
4.7
|
1.4
|
1.0
|
O3B
|
A:COA87
|
4.7
|
1.7
|
1.0
|
HD2
|
A:LYS54
|
4.8
|
1.1
|
1.0
|
HZ3
|
A:LYS54
|
4.8
|
1.9
|
1.0
|
CBP
|
A:COA87
|
4.9
|
1.0
|
1.0
|
H132
|
A:COA87
|
4.9
|
2.3
|
1.0
|
C1B
|
A:COA87
|
4.9
|
0.9
|
1.0
|
|
Phosphorus binding site 3 out
of 3 in 1aca
Go back to
Phosphorus Binding Sites List in 1aca
Phosphorus binding site 3 out
of 3 in the Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 3 of Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P87
b:5.3
occ:1.00
|
P2A
|
A:COA87
|
0.0
|
5.3
|
1.0
|
O5A
|
A:COA87
|
1.5
|
6.9
|
1.0
|
O4A
|
A:COA87
|
1.5
|
6.3
|
1.0
|
O3A
|
A:COA87
|
1.5
|
5.4
|
1.0
|
O6A
|
A:COA87
|
1.6
|
3.0
|
1.0
|
P1A
|
A:COA87
|
2.6
|
4.2
|
1.0
|
HZ2
|
A:LYS50
|
2.7
|
1.6
|
1.0
|
CCP
|
A:COA87
|
2.7
|
2.0
|
1.0
|
HZ1
|
A:LYS50
|
2.7
|
2.1
|
1.0
|
H122
|
A:COA87
|
2.8
|
3.2
|
1.0
|
HE2
|
A:LYS50
|
2.9
|
1.1
|
1.0
|
O5B
|
A:COA87
|
2.9
|
2.9
|
1.0
|
H133
|
A:COA87
|
3.0
|
1.6
|
1.0
|
NZ
|
A:LYS50
|
3.0
|
1.2
|
1.0
|
HE3
|
A:LYS50
|
3.1
|
1.4
|
1.0
|
HO1
|
A:COA87
|
3.1
|
0.6
|
1.0
|
CE
|
A:LYS50
|
3.2
|
0.6
|
1.0
|
O2A
|
A:COA87
|
3.2
|
3.6
|
1.0
|
H51A
|
A:COA87
|
3.4
|
3.6
|
1.0
|
H132
|
A:COA87
|
3.4
|
2.3
|
1.0
|
H52A
|
A:COA87
|
3.4
|
2.7
|
1.0
|
H121
|
A:COA87
|
3.4
|
2.0
|
1.0
|
C5B
|
A:COA87
|
3.5
|
2.8
|
1.0
|
H21
|
A:COA87
|
3.5
|
2.2
|
1.0
|
CDP
|
A:COA87
|
3.6
|
1.8
|
1.0
|
HE1
|
A:MET24
|
3.7
|
1.3
|
1.0
|
CBP
|
A:COA87
|
3.8
|
1.0
|
1.0
|
O1A
|
A:COA87
|
3.8
|
5.1
|
1.0
|
HZ3
|
A:LYS50
|
4.1
|
1.6
|
1.0
|
OAP
|
A:COA87
|
4.1
|
0.8
|
1.0
|
H22
|
A:COA87
|
4.1
|
2.0
|
1.0
|
C2P
|
A:COA87
|
4.1
|
2.0
|
1.0
|
S1P
|
A:COA87
|
4.2
|
2.6
|
1.0
|
H21
|
A:PLM88
|
4.3
|
1.1
|
1.0
|
HE2
|
A:MET24
|
4.4
|
1.3
|
1.0
|
CE
|
A:MET24
|
4.5
|
0.8
|
1.0
|
CAP
|
A:COA87
|
4.6
|
1.6
|
1.0
|
H131
|
A:COA87
|
4.6
|
2.9
|
1.0
|
H143
|
A:COA87
|
4.7
|
1.9
|
1.0
|
CD
|
A:LYS50
|
4.7
|
0.3
|
1.0
|
H52
|
A:PLM88
|
4.8
|
1.2
|
1.0
|
CEP
|
A:COA87
|
4.9
|
1.5
|
1.0
|
|
Reference:
B.B.Kragelund,
K.V.Andersen,
J.C.Madsen,
J.Knudsen,
F.M.Poulsen.
Three-Dimensional Structure of the Complex Between Acyl-Coenzyme A Binding Protein and Palmitoyl-Coenzyme A. J.Mol.Biol. V. 230 1260 1993.
ISSN: ISSN 0022-2836
PubMed: 8503960
DOI: 10.1006/JMBI.1993.1240
Page generated: Fri Sep 25 12:44:58 2020
|