Phosphorus in PDB 1aa9: Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure (pdb code 1aa9). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total 2 binding sites of Phosphorus where determined in the Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure, PDB code: 1aa9:
Jump to Phosphorus binding site number: 1; 2;

Phosphorus binding site 1 out of 2 in 1aa9

Go back to Phosphorus Binding Sites List in 1aa9
Phosphorus binding site 1 out of 2 in the Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P180

b:1.3
occ:1.00
PB A:GDP180 0.0 1.3 1.0
O1B A:GDP180 1.5 2.0 1.0
O2B A:GDP180 1.5 1.9 1.0
O3A A:GDP180 1.5 1.2 1.0
O3B A:GDP180 1.6 1.9 1.0
PA A:GDP180 2.6 1.2 1.0
O A:GLY12 3.0 0.9 1.0
HA2 A:GLY15 3.0 0.4 1.0
O1A A:GDP180 3.1 2.0 1.0
H A:SER17 3.2 0.4 1.0
H A:LYS16 3.2 0.9 1.0
O2A A:GDP180 3.3 2.0 1.0
MG A:MG173 3.4 3.5 1.0
N A:LYS16 3.7 0.4 1.0
CA A:GLY15 3.8 0.4 1.0
H A:GLY15 3.8 0.4 1.0
O5' A:GDP180 3.9 1.4 1.0
HA2 A:GLY12 3.9 0.6 1.0
C A:GLY12 4.0 0.6 1.0
C A:GLY15 4.0 0.5 1.0
OG A:SER17 4.0 1.3 1.0
N A:SER17 4.1 0.3 1.0
N A:GLY15 4.1 0.3 1.0
HB2 A:SER17 4.1 1.1 1.0
H A:ALA18 4.3 0.4 1.0
CA A:GLY12 4.3 0.7 1.0
HB3 A:LYS16 4.3 0.5 1.0
O A:TYR32 4.3 0.8 1.0
HB2 A:LYS16 4.4 0.6 1.0
HA3 A:GLY12 4.4 0.8 1.0
HG A:SER17 4.4 1.7 1.0
HB3 A:TYR32 4.5 0.7 1.0
HZ2 A:LYS16 4.5 1.8 1.0
CB A:SER17 4.6 0.5 1.0
H3' A:GDP180 4.6 1.5 1.0
CA A:LYS16 4.6 0.3 1.0
CB A:LYS16 4.7 0.4 1.0
HA3 A:GLY15 4.7 0.4 1.0
C A:LYS16 4.9 0.3 1.0
HA A:PRO34 4.9 0.8 1.0
CA A:SER17 5.0 0.4 1.0
O A:GLY15 5.0 1.1 1.0

Phosphorus binding site 2 out of 2 in 1aa9

Go back to Phosphorus Binding Sites List in 1aa9
Phosphorus binding site 2 out of 2 in the Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 2 of Human C-Ha-Ras(1-171)(Dot)Gdp, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P180

b:1.2
occ:1.00
PA A:GDP180 0.0 1.2 1.0
O1A A:GDP180 1.5 2.0 1.0
O3A A:GDP180 1.5 1.2 1.0
O2A A:GDP180 1.5 2.0 1.0
O5' A:GDP180 1.6 1.4 1.0
PB A:GDP180 2.6 1.3 1.0
H5'' A:GDP180 2.6 1.8 1.0
C5' A:GDP180 2.6 1.4 1.0
O1B A:GDP180 2.8 2.0 1.0
H3' A:GDP180 2.9 1.5 1.0
HA2 A:GLY15 3.2 0.4 1.0
O A:GLY12 3.2 0.9 1.0
H5' A:GDP180 3.3 1.7 1.0
O3B A:GDP180 3.6 1.9 1.0
O2B A:GDP180 3.7 1.9 1.0
C3' A:GDP180 3.7 1.4 1.0
C4' A:GDP180 3.8 1.2 1.0
CA A:GLY15 4.1 0.4 1.0
HA2 A:GLY13 4.2 0.5 1.0
HO3' A:GDP180 4.2 1.9 1.0
N A:GLY15 4.3 0.3 1.0
H A:GLY15 4.4 0.4 1.0
C A:GLY12 4.4 0.6 1.0
H4' A:GDP180 4.5 1.3 1.0
O3' A:GDP180 4.5 1.7 1.0
H8 A:GDP180 4.6 1.2 1.0
H2' A:GDP180 4.6 1.2 1.0
O4' A:GDP180 4.7 1.0 1.0
HA3 A:GLY15 4.7 0.4 1.0
C A:GLY13 4.7 0.4 1.0
C2' A:GDP180 4.8 1.2 1.0
O A:TYR32 4.8 0.8 1.0
H A:LYS16 4.8 0.9 1.0
CA A:GLY13 4.8 0.5 1.0
O A:GLY13 4.9 0.4 1.0
C A:VAL14 4.9 0.3 1.0

Reference:

Y.Ito, K.Yamasaki, J.Iwahara, T.Terada, A.Kamiya, M.Shirouzu, Y.Muto, G.Kawai, S.Yokoyama, E.D.Laue, M.Walchli, T.Shibata, S.Nishimura, T.Miyazawa. Regional Polysterism in the Gtp-Bound Form of the Human C-Ha-Ras Protein. Biochemistry V. 36 9109 1997.
ISSN: ISSN 0006-2960
PubMed: 9230043
DOI: 10.1021/BI970296U
Page generated: Fri Sep 25 12:41:23 2020

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