Phosphorus in PDB 1a59: Cold-Active Citrate Synthase

Protein crystallography data

The structure of Cold-Active Citrate Synthase, PDB code: 1a59 was solved by R.J.M.Russell, U.Gerike, M.J.Danson, D.W.Hough, G.L.Taylor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 100.00 / 2.09
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 70.800, 70.800, 307.800, 90.00, 90.00, 120.00
R / Rfree (%) 18.4 / 23.6

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the Cold-Active Citrate Synthase (pdb code 1a59). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total 3 binding sites of Phosphorus where determined in the Cold-Active Citrate Synthase, PDB code: 1a59:
Jump to Phosphorus binding site number: 1; 2; 3;

Phosphorus binding site 1 out of 3 in 1a59

Go back to Phosphorus Binding Sites List in 1a59
Phosphorus binding site 1 out of 3 in the Cold-Active Citrate Synthase


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of Cold-Active Citrate Synthase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P380

b:51.1
occ:1.00
P3B A:COA380 0.0 51.1 1.0
O8A A:COA380 1.6 48.5 1.0
O9A A:COA380 1.6 49.6 1.0
O7A A:COA380 1.6 49.0 1.0
O3B A:COA380 1.7 44.8 1.0
C3B A:COA380 2.7 37.7 1.0
C4B A:COA380 3.4 36.4 1.0
C2B A:COA380 4.0 34.9 1.0
O2B A:COA380 4.3 37.2 1.0
O4B A:COA380 4.3 29.1 1.0
C5B A:COA380 4.5 39.2 1.0
C1B A:COA380 4.6 28.4 1.0

Phosphorus binding site 2 out of 3 in 1a59

Go back to Phosphorus Binding Sites List in 1a59
Phosphorus binding site 2 out of 3 in the Cold-Active Citrate Synthase


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 2 of Cold-Active Citrate Synthase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P380

b:45.8
occ:1.00
P1A A:COA380 0.0 45.8 1.0
O2A A:COA380 1.5 47.2 1.0
O1A A:COA380 1.6 48.2 1.0
O3A A:COA380 1.6 45.2 1.0
O5B A:COA380 1.7 45.4 1.0
C5B A:COA380 2.7 39.2 1.0
P2A A:COA380 2.9 36.8 1.0
O5A A:COA380 3.4 39.9 1.0
O4A A:COA380 3.5 44.4 1.0
NZ A:LYS263 3.7 24.9 1.0
C3B A:COA380 3.7 37.7 1.0
C4B A:COA380 3.8 36.4 1.0
C2B A:COA380 3.9 34.9 1.0
O6A A:COA380 4.1 38.3 1.0
CE A:LYS263 4.2 21.9 1.0
C8A A:COA380 4.4 18.4 1.0
O4B A:COA380 4.5 29.1 1.0
CCP A:COA380 4.7 22.4 1.0
C1B A:COA380 4.7 28.4 1.0
N9A A:COA380 4.8 22.0 1.0
CAP A:COA380 4.9 13.8 1.0
CDP A:COA380 4.9 17.9 1.0
O2B A:COA380 5.0 37.2 1.0

Phosphorus binding site 3 out of 3 in 1a59

Go back to Phosphorus Binding Sites List in 1a59
Phosphorus binding site 3 out of 3 in the Cold-Active Citrate Synthase


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 3 of Cold-Active Citrate Synthase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P380

b:36.8
occ:1.00
P2A A:COA380 0.0 36.8 1.0
O4A A:COA380 1.5 44.4 1.0
O5A A:COA380 1.6 39.9 1.0
O3A A:COA380 1.6 45.2 1.0
O6A A:COA380 1.7 38.3 1.0
CCP A:COA380 2.7 22.4 1.0
P1A A:COA380 2.9 45.8 1.0
O1A A:COA380 3.3 48.2 1.0
O5B A:COA380 3.4 45.4 1.0
CBP A:COA380 3.8 17.4 1.0
CDP A:COA380 3.8 17.9 1.0
NE A:ARG270 4.0 10.8 1.0
O2A A:COA380 4.2 47.2 1.0
NH2 A:ARG270 4.2 10.3 1.0
C5B A:COA380 4.2 39.2 1.0
CAP A:COA380 4.4 13.8 1.0
CZ A:ARG270 4.6 11.3 1.0
OAP A:COA380 4.8 13.8 1.0
CA A:ARG270 4.8 8.0 1.0
NZ A:LYS273 4.9 14.7 1.0
CD A:ARG270 5.0 8.3 1.0

Reference:

R.J.Russell, U.Gerike, M.J.Danson, D.W.Hough, G.L.Taylor. Structural Adaptations of the Cold-Active Citrate Synthase From An Antarctic Bacterium. Structure V. 6 351 1998.
ISSN: ISSN 0969-2126
PubMed: 9551556
DOI: 10.1016/S0969-2126(98)00037-9
Page generated: Fri Sep 25 12:15:04 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy