Phosphorus in PDB 1a51: Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Phosphorus Binding Sites:
Phosphorus binding site 1 out
of 40 in 1a51
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Phosphorus Binding Sites List in 1a51
Phosphorus binding site 1 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 1 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P69
b:3.0
occ:1.00
|
P
|
A:G69
|
0.0
|
3.0
|
1.0
|
OP1
|
A:G69
|
1.5
|
3.0
|
1.0
|
OP2
|
A:G69
|
1.5
|
3.0
|
1.0
|
O5'
|
A:G69
|
1.6
|
2.7
|
1.0
|
O3'
|
A:G68
|
1.6
|
3.3
|
1.0
|
C3'
|
A:G68
|
2.6
|
3.4
|
1.0
|
C5'
|
A:G69
|
2.6
|
2.7
|
1.0
|
H3'
|
A:G68
|
2.7
|
3.2
|
1.0
|
H5''
|
A:G69
|
2.7
|
2.8
|
1.0
|
H5'
|
A:G69
|
3.1
|
2.8
|
1.0
|
HO2'
|
A:G68
|
3.2
|
3.5
|
1.0
|
H2'
|
A:G68
|
3.4
|
3.1
|
1.0
|
C2'
|
A:G68
|
3.4
|
3.4
|
1.0
|
H3'
|
A:G69
|
3.6
|
2.3
|
1.0
|
OP2
|
A:C70
|
3.6
|
2.2
|
1.0
|
O2'
|
A:G68
|
3.7
|
3.6
|
1.0
|
H8
|
A:G69
|
3.8
|
2.5
|
1.0
|
C4'
|
A:G69
|
3.9
|
2.6
|
1.0
|
C4'
|
A:G68
|
3.9
|
3.8
|
1.0
|
H5''
|
A:G68
|
4.0
|
4.0
|
1.0
|
H4'
|
A:G68
|
4.1
|
3.9
|
1.0
|
C3'
|
A:G69
|
4.2
|
2.4
|
1.0
|
C5'
|
A:G68
|
4.5
|
3.9
|
1.0
|
O3'
|
A:G69
|
4.5
|
2.4
|
1.0
|
H4'
|
A:G69
|
4.6
|
2.8
|
1.0
|
O4'
|
A:G69
|
4.6
|
2.6
|
1.0
|
HO5'
|
A:G68
|
4.7
|
3.6
|
1.0
|
P
|
A:C70
|
4.7
|
2.3
|
1.0
|
C1'
|
A:G68
|
4.8
|
3.6
|
1.0
|
C8
|
A:G69
|
4.9
|
2.4
|
1.0
|
O4'
|
A:G68
|
5.0
|
3.8
|
1.0
|
|
Phosphorus binding site 2 out
of 40 in 1a51
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Phosphorus Binding Sites List in 1a51
Phosphorus binding site 2 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 2 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P70
b:2.3
occ:1.00
|
P
|
A:C70
|
0.0
|
2.3
|
1.0
|
OP1
|
A:C70
|
1.5
|
2.4
|
1.0
|
OP2
|
A:C70
|
1.5
|
2.2
|
1.0
|
O5'
|
A:C70
|
1.6
|
2.1
|
1.0
|
O3'
|
A:G69
|
1.6
|
2.4
|
1.0
|
H3'
|
A:G69
|
2.6
|
2.3
|
1.0
|
C3'
|
A:G69
|
2.6
|
2.4
|
1.0
|
C5'
|
A:C70
|
2.6
|
2.2
|
1.0
|
H5'
|
A:C70
|
2.7
|
2.3
|
1.0
|
H6
|
A:C70
|
3.0
|
2.0
|
1.0
|
H5''
|
A:C70
|
3.1
|
2.1
|
1.0
|
HO2'
|
A:G69
|
3.5
|
2.6
|
1.0
|
C2'
|
A:G69
|
3.6
|
2.3
|
1.0
|
H2'
|
A:G69
|
3.6
|
2.1
|
1.0
|
C4'
|
A:G69
|
3.8
|
2.6
|
1.0
|
C4'
|
A:C70
|
3.9
|
2.0
|
1.0
|
O4'
|
A:C70
|
4.0
|
2.1
|
1.0
|
H4'
|
A:G69
|
4.1
|
2.8
|
1.0
|
C6
|
A:C70
|
4.1
|
1.9
|
1.0
|
O5'
|
A:G69
|
4.1
|
2.7
|
1.0
|
O2'
|
A:G69
|
4.1
|
2.5
|
1.0
|
H5''
|
A:G69
|
4.2
|
2.8
|
1.0
|
C5'
|
A:G69
|
4.3
|
2.7
|
1.0
|
H5
|
A:C70
|
4.3
|
1.9
|
1.0
|
H3'
|
A:C70
|
4.4
|
1.7
|
1.0
|
OP1
|
A:G69
|
4.6
|
3.0
|
1.0
|
H4'
|
A:C70
|
4.6
|
2.1
|
1.0
|
C5
|
A:C70
|
4.6
|
1.8
|
1.0
|
P
|
A:G69
|
4.7
|
3.0
|
1.0
|
C3'
|
A:C70
|
4.7
|
1.8
|
1.0
|
OP2
|
A:G69
|
4.8
|
3.0
|
1.0
|
C1'
|
A:G69
|
4.9
|
2.4
|
1.0
|
O4'
|
A:G69
|
4.9
|
2.6
|
1.0
|
|
Phosphorus binding site 3 out
of 40 in 1a51
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Phosphorus Binding Sites List in 1a51
Phosphorus binding site 3 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 3 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P71
b:1.5
occ:1.00
|
P
|
A:C71
|
0.0
|
1.5
|
1.0
|
OP1
|
A:C71
|
1.5
|
1.5
|
1.0
|
OP2
|
A:C71
|
1.5
|
1.5
|
1.0
|
O5'
|
A:C71
|
1.6
|
1.3
|
1.0
|
O3'
|
A:C70
|
1.6
|
1.8
|
1.0
|
C3'
|
A:C70
|
2.6
|
1.8
|
1.0
|
C5'
|
A:C71
|
2.6
|
1.3
|
1.0
|
H3'
|
A:C70
|
2.6
|
1.7
|
1.0
|
H5''
|
A:C71
|
2.8
|
1.3
|
1.0
|
H5'
|
A:C71
|
3.0
|
1.5
|
1.0
|
H6
|
A:C71
|
3.2
|
1.2
|
1.0
|
H2'
|
A:C70
|
3.4
|
1.6
|
1.0
|
HO2'
|
A:C70
|
3.4
|
1.9
|
1.0
|
C2'
|
A:C70
|
3.4
|
1.7
|
1.0
|
H3'
|
A:C71
|
3.7
|
1.0
|
1.0
|
O2'
|
A:C70
|
3.9
|
1.8
|
1.0
|
C4'
|
A:C70
|
3.9
|
2.0
|
1.0
|
C4'
|
A:C71
|
3.9
|
1.2
|
1.0
|
H5''
|
A:C70
|
4.0
|
2.1
|
1.0
|
H4'
|
A:C70
|
4.1
|
2.1
|
1.0
|
OP2
|
A:G72
|
4.2
|
1.0
|
1.0
|
C6
|
A:C71
|
4.2
|
1.1
|
1.0
|
C3'
|
A:C71
|
4.3
|
1.0
|
1.0
|
H5
|
A:C71
|
4.4
|
1.2
|
1.0
|
O4'
|
A:C71
|
4.4
|
1.2
|
1.0
|
C5'
|
A:C70
|
4.5
|
2.2
|
1.0
|
N7
|
A:G72
|
4.7
|
0.8
|
1.0
|
H4'
|
A:C71
|
4.7
|
1.2
|
1.0
|
C1'
|
A:C70
|
4.8
|
1.9
|
1.0
|
C5
|
A:C71
|
4.8
|
1.1
|
1.0
|
O4'
|
A:C70
|
5.0
|
2.1
|
1.0
|
|
Phosphorus binding site 4 out
of 40 in 1a51
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Phosphorus Binding Sites List in 1a51
Phosphorus binding site 4 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 4 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P72
b:0.9
occ:1.00
|
P
|
A:G72
|
0.0
|
0.9
|
1.0
|
OP1
|
A:G72
|
1.5
|
0.9
|
1.0
|
OP2
|
A:G72
|
1.5
|
1.0
|
1.0
|
O5'
|
A:G72
|
1.6
|
0.8
|
1.0
|
O3'
|
A:C71
|
1.6
|
0.9
|
1.0
|
H3'
|
A:C71
|
2.6
|
1.0
|
1.0
|
C3'
|
A:C71
|
2.6
|
1.0
|
1.0
|
C5'
|
A:G72
|
2.6
|
0.8
|
1.0
|
H5'
|
A:G72
|
2.8
|
0.9
|
1.0
|
H8
|
A:G72
|
2.9
|
0.7
|
1.0
|
H5''
|
A:G72
|
3.1
|
0.9
|
1.0
|
HO2'
|
A:C71
|
3.4
|
1.0
|
1.0
|
C2'
|
A:C71
|
3.6
|
0.9
|
1.0
|
H2'
|
A:C71
|
3.7
|
0.8
|
1.0
|
C4'
|
A:C71
|
3.8
|
1.2
|
1.0
|
H5''
|
A:C71
|
3.9
|
1.3
|
1.0
|
C4'
|
A:G72
|
3.9
|
0.7
|
1.0
|
H4'
|
A:C71
|
4.0
|
1.2
|
1.0
|
C8
|
A:G72
|
4.0
|
0.7
|
1.0
|
O2'
|
A:C71
|
4.0
|
0.9
|
1.0
|
O4'
|
A:G72
|
4.1
|
0.6
|
1.0
|
H3'
|
A:G72
|
4.1
|
0.7
|
1.0
|
C5'
|
A:C71
|
4.2
|
1.3
|
1.0
|
O5'
|
A:C71
|
4.4
|
1.3
|
1.0
|
C3'
|
A:G72
|
4.6
|
0.6
|
1.0
|
H4'
|
A:G72
|
4.7
|
0.7
|
1.0
|
N7
|
A:G72
|
4.8
|
0.8
|
1.0
|
C1'
|
A:C71
|
4.9
|
1.0
|
1.0
|
O4'
|
A:C71
|
5.0
|
1.2
|
1.0
|
OP1
|
A:C71
|
5.0
|
1.5
|
1.0
|
N9
|
A:G72
|
5.0
|
0.6
|
1.0
|
OP1
|
A:A101
|
5.0
|
1.7
|
1.0
|
|
Phosphorus binding site 5 out
of 40 in 1a51
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Phosphorus Binding Sites List in 1a51
Phosphorus binding site 5 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 5 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P73
b:0.7
occ:1.00
|
P
|
A:A73
|
0.0
|
0.7
|
1.0
|
OP1
|
A:A73
|
1.5
|
0.9
|
1.0
|
OP2
|
A:A73
|
1.5
|
1.1
|
1.0
|
O5'
|
A:A73
|
1.6
|
0.8
|
1.0
|
O3'
|
A:G72
|
1.6
|
0.7
|
1.0
|
C3'
|
A:G72
|
2.6
|
0.6
|
1.0
|
C5'
|
A:A73
|
2.6
|
1.0
|
1.0
|
H5'
|
A:A73
|
2.7
|
1.1
|
1.0
|
H3'
|
A:G72
|
2.8
|
0.7
|
1.0
|
HO2'
|
A:G72
|
2.9
|
0.6
|
1.0
|
H2'
|
A:G72
|
3.1
|
0.5
|
1.0
|
C2'
|
A:G72
|
3.2
|
0.5
|
1.0
|
H5''
|
A:A73
|
3.4
|
1.1
|
1.0
|
O2'
|
A:G72
|
3.5
|
0.5
|
1.0
|
C4'
|
A:A73
|
3.6
|
0.9
|
1.0
|
H4'
|
A:A73
|
3.7
|
1.0
|
1.0
|
O4'
|
A:A73
|
3.8
|
0.7
|
1.0
|
OP2
|
A:A101
|
3.9
|
1.7
|
1.0
|
C4'
|
A:G72
|
4.0
|
0.7
|
1.0
|
H4'
|
A:G72
|
4.1
|
0.7
|
1.0
|
H8
|
A:A73
|
4.2
|
0.7
|
1.0
|
H62
|
A:A101
|
4.4
|
1.2
|
1.0
|
H5''
|
A:G72
|
4.4
|
0.9
|
1.0
|
H5''
|
A:G100
|
4.6
|
2.3
|
1.0
|
C1'
|
A:G72
|
4.6
|
0.5
|
1.0
|
N7
|
A:A101
|
4.7
|
1.2
|
1.0
|
C5'
|
A:G72
|
4.7
|
0.8
|
1.0
|
O6
|
A:G102
|
4.8
|
1.0
|
1.0
|
N7
|
A:G102
|
4.9
|
1.0
|
1.0
|
O4'
|
A:G72
|
4.9
|
0.6
|
1.0
|
|
Phosphorus binding site 6 out
of 40 in 1a51
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Phosphorus Binding Sites List in 1a51
Phosphorus binding site 6 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 6 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P74
b:1.2
occ:1.00
|
P
|
A:U74
|
0.0
|
1.2
|
1.0
|
OP1
|
A:U74
|
1.5
|
1.4
|
1.0
|
OP2
|
A:U74
|
1.5
|
1.2
|
1.0
|
O5'
|
A:U74
|
1.6
|
1.2
|
1.0
|
O3'
|
A:A73
|
1.6
|
1.1
|
1.0
|
H3'
|
A:A73
|
2.5
|
1.0
|
1.0
|
C3'
|
A:A73
|
2.6
|
1.0
|
1.0
|
C5'
|
A:U74
|
2.6
|
1.2
|
1.0
|
H5''
|
A:U74
|
2.9
|
1.4
|
1.0
|
H5'
|
A:U74
|
2.9
|
1.2
|
1.0
|
C4'
|
A:A73
|
3.7
|
0.9
|
1.0
|
HO2'
|
A:A73
|
3.7
|
1.0
|
1.0
|
H5''
|
A:A73
|
3.7
|
1.1
|
1.0
|
C2'
|
A:A73
|
3.8
|
0.9
|
1.0
|
H3'
|
A:U74
|
3.8
|
1.2
|
1.0
|
H4'
|
A:A73
|
3.8
|
1.0
|
1.0
|
H5'
|
A:A73
|
3.9
|
1.1
|
1.0
|
H2'
|
A:A73
|
3.9
|
0.9
|
1.0
|
C4'
|
A:U74
|
3.9
|
1.2
|
1.0
|
H6
|
A:U74
|
4.0
|
1.1
|
1.0
|
C5'
|
A:A73
|
4.0
|
1.0
|
1.0
|
OP2
|
A:G75
|
4.2
|
1.5
|
1.0
|
O2'
|
A:A73
|
4.3
|
1.0
|
1.0
|
C3'
|
A:U74
|
4.3
|
1.2
|
1.0
|
O4'
|
A:U74
|
4.5
|
1.1
|
1.0
|
H4'
|
A:U74
|
4.7
|
1.2
|
1.0
|
O3'
|
A:U74
|
4.8
|
1.3
|
1.0
|
O4'
|
A:A73
|
4.9
|
0.7
|
1.0
|
C1'
|
A:A73
|
4.9
|
0.8
|
1.0
|
C6
|
A:U74
|
5.0
|
1.0
|
1.0
|
|
Phosphorus binding site 7 out
of 40 in 1a51
Go back to
Phosphorus Binding Sites List in 1a51
Phosphorus binding site 7 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 7 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P75
b:1.4
occ:1.00
|
P
|
A:G75
|
0.0
|
1.4
|
1.0
|
OP1
|
A:G75
|
1.5
|
1.5
|
1.0
|
OP2
|
A:G75
|
1.5
|
1.5
|
1.0
|
O5'
|
A:G75
|
1.6
|
1.4
|
1.0
|
O3'
|
A:U74
|
1.6
|
1.3
|
1.0
|
H3'
|
A:U74
|
2.6
|
1.2
|
1.0
|
C3'
|
A:U74
|
2.6
|
1.2
|
1.0
|
C5'
|
A:G75
|
2.6
|
1.4
|
1.0
|
H5'
|
A:G75
|
2.8
|
1.5
|
1.0
|
H5''
|
A:G75
|
3.1
|
1.5
|
1.0
|
HO2'
|
A:U74
|
3.4
|
1.5
|
1.0
|
H8
|
A:G75
|
3.5
|
1.3
|
1.0
|
C2'
|
A:U74
|
3.5
|
1.2
|
1.0
|
H2'
|
A:U74
|
3.6
|
1.2
|
1.0
|
C4'
|
A:U74
|
3.9
|
1.2
|
1.0
|
C4'
|
A:G75
|
3.9
|
1.4
|
1.0
|
O2'
|
A:U74
|
4.0
|
1.2
|
1.0
|
O4'
|
A:G75
|
4.1
|
1.4
|
1.0
|
H4'
|
A:U74
|
4.1
|
1.2
|
1.0
|
H5''
|
A:U74
|
4.2
|
1.4
|
1.0
|
O5'
|
A:U74
|
4.2
|
1.2
|
1.0
|
H3'
|
A:G75
|
4.3
|
1.4
|
1.0
|
C5'
|
A:U74
|
4.3
|
1.2
|
1.0
|
C8
|
A:G75
|
4.5
|
1.3
|
1.0
|
H4'
|
A:G75
|
4.7
|
1.5
|
1.0
|
C3'
|
A:G75
|
4.7
|
1.4
|
1.0
|
C1'
|
A:U74
|
4.8
|
1.1
|
1.0
|
OP2
|
A:G76
|
4.9
|
1.5
|
1.0
|
O4'
|
A:U74
|
4.9
|
1.1
|
1.0
|
|
Phosphorus binding site 8 out
of 40 in 1a51
Go back to
Phosphorus Binding Sites List in 1a51
Phosphorus binding site 8 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 8 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P76
b:1.5
occ:1.00
|
P
|
A:G76
|
0.0
|
1.5
|
1.0
|
OP1
|
A:G76
|
1.5
|
1.6
|
1.0
|
OP2
|
A:G76
|
1.5
|
1.5
|
1.0
|
O5'
|
A:G76
|
1.6
|
1.5
|
1.0
|
O3'
|
A:G75
|
1.6
|
1.5
|
1.0
|
H3'
|
A:G75
|
2.6
|
1.4
|
1.0
|
C3'
|
A:G75
|
2.6
|
1.4
|
1.0
|
C5'
|
A:G76
|
2.6
|
1.5
|
1.0
|
H5'
|
A:G76
|
2.7
|
1.6
|
1.0
|
H5''
|
A:G76
|
3.2
|
1.6
|
1.0
|
H5''
|
A:G75
|
3.5
|
1.5
|
1.0
|
HO2'
|
A:G75
|
3.6
|
1.5
|
1.0
|
H8
|
A:G76
|
3.6
|
1.4
|
1.0
|
C2'
|
A:G75
|
3.7
|
1.4
|
1.0
|
C4'
|
A:G75
|
3.8
|
1.4
|
1.0
|
H2'
|
A:G75
|
3.8
|
1.4
|
1.0
|
O4'
|
A:G76
|
3.8
|
1.4
|
1.0
|
C4'
|
A:G76
|
3.8
|
1.5
|
1.0
|
H4'
|
A:G75
|
4.0
|
1.5
|
1.0
|
C5'
|
A:G75
|
4.1
|
1.4
|
1.0
|
O2'
|
A:G75
|
4.1
|
1.5
|
1.0
|
H4'
|
A:G76
|
4.4
|
1.5
|
1.0
|
C8
|
A:G76
|
4.6
|
1.4
|
1.0
|
O5'
|
A:G75
|
4.6
|
1.4
|
1.0
|
H3'
|
A:G76
|
4.8
|
1.5
|
1.0
|
O4'
|
A:G75
|
4.9
|
1.4
|
1.0
|
C1'
|
A:G75
|
4.9
|
1.4
|
1.0
|
C3'
|
A:G76
|
5.0
|
1.5
|
1.0
|
|
Phosphorus binding site 9 out
of 40 in 1a51
Go back to
Phosphorus Binding Sites List in 1a51
Phosphorus binding site 9 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 9 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P77
b:1.5
occ:1.00
|
P
|
A:U77
|
0.0
|
1.5
|
1.0
|
OP1
|
A:U77
|
1.5
|
1.6
|
1.0
|
OP2
|
A:U77
|
1.5
|
1.5
|
1.0
|
O5'
|
A:U77
|
1.6
|
1.5
|
1.0
|
O3'
|
A:G76
|
1.6
|
1.6
|
1.0
|
C3'
|
A:G76
|
2.6
|
1.5
|
1.0
|
C5'
|
A:U77
|
2.6
|
1.5
|
1.0
|
H3'
|
A:G76
|
2.7
|
1.5
|
1.0
|
H5''
|
A:U77
|
2.8
|
1.6
|
1.0
|
H5'
|
A:U77
|
3.0
|
1.5
|
1.0
|
H6
|
A:U77
|
3.2
|
1.4
|
1.0
|
HO2'
|
A:G76
|
3.3
|
1.5
|
1.0
|
H2'
|
A:G76
|
3.4
|
1.5
|
1.0
|
C2'
|
A:G76
|
3.4
|
1.4
|
1.0
|
O2'
|
A:G76
|
3.8
|
1.4
|
1.0
|
H3'
|
A:U77
|
3.9
|
1.6
|
1.0
|
C4'
|
A:U77
|
3.9
|
1.5
|
1.0
|
C4'
|
A:G76
|
3.9
|
1.5
|
1.0
|
H5''
|
A:G76
|
3.9
|
1.6
|
1.0
|
H4'
|
A:G76
|
4.1
|
1.5
|
1.0
|
C6
|
A:U77
|
4.2
|
1.4
|
1.0
|
O4'
|
A:U77
|
4.3
|
1.4
|
1.0
|
H5
|
A:U77
|
4.3
|
1.4
|
1.0
|
C3'
|
A:U77
|
4.4
|
1.5
|
1.0
|
H21
|
A:G98
|
4.4
|
1.5
|
1.0
|
C5'
|
A:G76
|
4.5
|
1.5
|
1.0
|
C5
|
A:U77
|
4.7
|
1.4
|
1.0
|
H4'
|
A:U77
|
4.7
|
1.5
|
1.0
|
C1'
|
A:G76
|
4.8
|
1.4
|
1.0
|
H1
|
A:G98
|
4.8
|
1.4
|
1.0
|
OP2
|
A:A78
|
4.9
|
1.7
|
1.0
|
O4'
|
A:G76
|
5.0
|
1.4
|
1.0
|
|
Phosphorus binding site 10 out
of 40 in 1a51
Go back to
Phosphorus Binding Sites List in 1a51
Phosphorus binding site 10 out
of 40 in the Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures
Mono view
Stereo pair view
|
A full contact list of Phosphorus with other atoms in the P binding
site number 10 of Loop D/Loop E Arm of E. Coli 5S Rrna, uc(Nmr), 9 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:P78
b:1.7
occ:1.00
|
P
|
A:A78
|
0.0
|
1.7
|
1.0
|
OP1
|
A:A78
|
1.5
|
1.7
|
1.0
|
OP2
|
A:A78
|
1.5
|
1.7
|
1.0
|
O5'
|
A:A78
|
1.6
|
1.7
|
1.0
|
O3'
|
A:U77
|
1.6
|
1.6
|
1.0
|
H3'
|
A:U77
|
2.6
|
1.6
|
1.0
|
C3'
|
A:U77
|
2.6
|
1.5
|
1.0
|
C5'
|
A:A78
|
2.6
|
1.7
|
1.0
|
H5'
|
A:A78
|
2.7
|
1.7
|
1.0
|
H5''
|
A:A78
|
3.1
|
1.8
|
1.0
|
HO2'
|
A:U77
|
3.3
|
1.6
|
1.0
|
H2'
|
A:U77
|
3.5
|
1.5
|
1.0
|
C2'
|
A:U77
|
3.5
|
1.5
|
1.0
|
O2'
|
A:U77
|
3.9
|
1.5
|
1.0
|
C4'
|
A:U77
|
3.9
|
1.5
|
1.0
|
C4'
|
A:A78
|
3.9
|
1.7
|
1.0
|
H8
|
A:A78
|
3.9
|
1.6
|
1.0
|
H5''
|
A:U77
|
4.0
|
1.6
|
1.0
|
O4'
|
A:A78
|
4.0
|
1.6
|
1.0
|
H4'
|
A:U77
|
4.1
|
1.5
|
1.0
|
C5'
|
A:U77
|
4.5
|
1.5
|
1.0
|
H4'
|
A:A78
|
4.6
|
1.7
|
1.0
|
H3'
|
A:A78
|
4.6
|
1.7
|
1.0
|
C1'
|
A:U77
|
4.8
|
1.4
|
1.0
|
C3'
|
A:A78
|
4.9
|
1.7
|
1.0
|
C8
|
A:A78
|
4.9
|
1.6
|
1.0
|
O5'
|
A:U77
|
4.9
|
1.5
|
1.0
|
O4'
|
A:U77
|
5.0
|
1.4
|
1.0
|
|
Reference:
A.Dallas,
P.B.Moore.
The Loop E-Loop D Region of Escherichia Coli 5S Rrna: the Solution Structure Reveals An Unusual Loop That May Be Important For Binding Ribosomal Proteins. Structure V. 5 1639 1997.
ISSN: ISSN 0969-2126
PubMed: 9438864
DOI: 10.1016/S0969-2126(97)00311-0
Page generated: Fri Sep 25 12:14:16 2020
|