Phosphorus in PDB 121p: Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras

Protein crystallography data

The structure of Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras, PDB code: 121p was solved by U.Krengel, K.Scheffzek, A.Scherer, W.Kabsch, A.Wittinghofer, E.F.Pai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.54
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 40.200, 40.200, 161.400, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / n/a

Phosphorus Binding Sites:

The binding sites of Phosphorus atom in the Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras (pdb code 121p). This binding sites where shown within 5.0 Angstroms radius around Phosphorus atom.
In total 3 binding sites of Phosphorus where determined in the Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras, PDB code: 121p:
Jump to Phosphorus binding site number: 1; 2; 3;

Phosphorus binding site 1 out of 3 in 121p

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Phosphorus binding site 1 out of 3 in the Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 1 of Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P167

b:11.7
occ:1.00
PG A:GCP167 0.0 11.7 1.0
O2G A:GCP167 1.5 12.6 1.0
O1G A:GCP167 1.5 13.3 1.0
O3G A:GCP167 1.6 13.2 1.0
C3B A:GCP167 1.7 10.1 1.0
PB A:GCP167 3.0 12.0 1.0
MG A:MG168 3.2 14.6 1.0
O2B A:GCP167 3.5 9.3 1.0
O A:HOH175 3.6 18.2 1.0
O1B A:GCP167 3.7 9.3 1.0
O A:HOH188 3.7 31.9 1.0
O A:HOH172 3.8 13.8 1.0
NZ A:LYS16 3.9 10.0 1.0
N A:THR35 4.0 10.6 1.0
N A:GLY13 4.1 14.7 1.0
N A:GLY60 4.1 17.0 1.0
O A:HOH173 4.2 10.9 1.0
O3A A:GCP167 4.3 12.3 1.0
CA A:PRO34 4.3 12.1 1.0
CE A:LYS16 4.5 9.0 1.0
CA A:GLY12 4.6 14.0 1.0
OG1 A:THR35 4.6 11.3 1.0
CB A:THR35 4.7 12.2 1.0
C A:PRO34 4.7 11.7 1.0
CA A:GLY60 4.8 22.7 1.0
O2A A:GCP167 4.9 11.4 1.0
O A:THR58 4.9 16.0 1.0
CB A:PRO34 4.9 11.6 1.0
C A:GLY12 4.9 14.8 1.0
CA A:GLY13 4.9 14.4 1.0
CA A:THR35 4.9 11.9 1.0
O A:HOH170 5.0 16.1 1.0

Phosphorus binding site 2 out of 3 in 121p

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Phosphorus binding site 2 out of 3 in the Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 2 of Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P167

b:12.0
occ:1.00
PB A:GCP167 0.0 12.0 1.0
O2B A:GCP167 1.5 9.3 1.0
O1B A:GCP167 1.5 9.3 1.0
O3A A:GCP167 1.6 12.3 1.0
C3B A:GCP167 1.7 10.1 1.0
PA A:GCP167 2.9 11.6 1.0
PG A:GCP167 3.0 11.7 1.0
MG A:MG168 3.3 14.6 1.0
O2A A:GCP167 3.4 11.4 1.0
O2G A:GCP167 3.5 12.6 1.0
O3G A:GCP167 3.5 13.2 1.0
O1A A:GCP167 3.5 12.2 1.0
O A:HOH172 3.7 13.8 1.0
N A:LYS16 3.7 9.1 1.0
N A:GLY15 3.8 9.1 1.0
N A:GLY13 3.9 14.7 1.0
NZ A:LYS16 3.9 10.0 1.0
O5' A:GCP167 4.0 10.9 1.0
CA A:GLY13 4.0 14.4 1.0
CA A:GLY15 4.2 9.0 1.0
N A:SER17 4.2 9.8 1.0
O A:HOH173 4.2 10.9 1.0
N A:VAL14 4.2 11.2 1.0
O1G A:GCP167 4.2 13.3 1.0
C A:GLY13 4.3 11.5 1.0
C A:GLY15 4.3 10.0 1.0
CB A:LYS16 4.4 7.8 1.0
C5' A:GCP167 4.4 11.2 1.0
CE A:LYS16 4.5 9.0 1.0
CA A:LYS16 4.6 8.9 1.0
OG A:SER17 4.6 9.9 1.0
CG A:LYS16 4.8 7.0 1.0
CB A:SER17 4.8 10.7 1.0
C A:VAL14 4.9 10.1 1.0
C A:LYS16 4.9 9.5 1.0
O A:GLY13 5.0 11.2 1.0

Phosphorus binding site 3 out of 3 in 121p

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Phosphorus binding site 3 out of 3 in the Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras


Mono view


Stereo pair view

A full contact list of Phosphorus with other atoms in the P binding site number 3 of Struktur Und Guanosintriphosphat-Hydrolysemechanismus Des C-Terminal Verkuerzten Menschlichen Krebsproteins P21-H-Ras within 5.0Å range:
probe atom residue distance (Å) B Occ
A:P167

b:11.6
occ:1.00
PA A:GCP167 0.0 11.6 1.0
O2A A:GCP167 1.5 11.4 1.0
O1A A:GCP167 1.5 12.2 1.0
O5' A:GCP167 1.6 10.9 1.0
O3A A:GCP167 1.6 12.3 1.0
C5' A:GCP167 2.7 11.2 1.0
PB A:GCP167 2.9 12.0 1.0
O2B A:GCP167 3.1 9.3 1.0
O A:HOH172 3.6 13.8 1.0
C3B A:GCP167 3.7 10.1 1.0
O A:HOH186 3.8 24.8 1.0
CA A:GLY15 3.9 9.0 1.0
C4' A:GCP167 3.9 11.3 1.0
O1B A:GCP167 3.9 9.3 1.0
O A:HOH170 4.1 16.1 1.0
C3' A:GCP167 4.2 14.2 1.0
N A:GLY15 4.2 9.1 1.0
N A:ALA18 4.3 10.2 1.0
CB A:SER17 4.3 10.7 1.0
C2' A:GCP167 4.3 14.8 1.0
C A:GLY15 4.4 10.0 1.0
N A:SER17 4.4 9.8 1.0
O4' A:GCP167 4.5 12.3 1.0
MG A:MG168 4.6 14.6 1.0
N A:LYS16 4.7 9.1 1.0
CB A:ALA18 4.7 10.4 1.0
C8 A:GCP167 4.7 12.8 1.0
CA A:SER17 4.8 10.3 1.0
OG A:SER17 4.9 9.9 1.0
C1' A:GCP167 5.0 13.9 1.0

Reference:

U.Krengel, U.Krengel, K.Scheffzek, A.Scherer, W.Kabsch, A.Wittinghofer, E.F.Pai. N/A N/A.
Page generated: Fri Sep 25 11:13:23 2020

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